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Kbase Uniref50

kbase_uniref50

Tenant: KBase · Snapshot 2026-04-29T21:35:53.838483+00:00

Reference

Schema status

discovered

Curation status

discovered

Source

berdl-spark-connect://metrics.berdl.kbase.us:443

Citation & Attribution

Provider: KBase

Schema Browser

Tables (4)

cluster clustermember crossreference entity

Key Tables

Table	Description	Rows
`cluster`		—
`clustermember`		—
`crossreference`		—
`entity`		—

Projects Using This Collection

Gene Function Ecological Agora

Across the prokaryotic tree (GTDB r214; 293,059 genomes / 27,690 species), build a multi-resolution **innovation + acqui...

Acinetobacter baylyi ADP1 Data Explorer

What is the scope and structure of a comprehensive ADP1 database, and how do its annotations, metabolic models, and phen...

Atlas Pages

data type

Genes, Proteins, and Annotations

Gene and protein identifiers, functional annotation, literature coverage, orthology, and controlled vocabulary layers used to connect raw genomes to interpretable biology.

derived product

Functional Innovation KO Atlas

Reusable clade-level functional innovation and acquisition-depth outputs from the ecological agora project.

data collection

UniRef50

UniRef protein clusters at 50% identity

Atlas Reuse

atlas_table

Functional Innovation KO Atlas

candidate · 0 downstream projects

Start Exploring

Access the full Kbase Uniref50 data through BERDL JupyterHub.

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