Kbase Uniref100
kbase_uniref100
Tenant: KBase ยท Snapshot 2026-04-29T21:35:53.838483+00:00
Schema status
discoveredCuration status
discoveredSource
berdl-spark-connect://metrics.berdl.kbase.us:443Citation & Attribution
Provider: KBase
Schema Browser
cluster
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Projects Using This Collection
Atlas Pages
Pangenome openness shapes functional opportunity
Pangenome openness and gene-content class affect which functions are stable, variable, mobile, or available for niche adaptation.
data collectionPangenome Collection
Genome and pangenome tables for comparative genomics, conservation, openness, annotation, and cross-project derived products.
data typeGenomes and Pangenomes
Data type lens for genome metadata, pangenome structure, annotations, and species-level comparative genomics.
data typeGenes, Proteins, and Annotations
Gene and protein identifiers, functional annotation, literature coverage, orthology, and controlled vocabulary layers used to connect raw genomes to interpretable biology.
data collectionUniRef100
UniRef protein clusters at 100% identity
topicPangenome Architecture and Gene-Content Evolution
Cross-project synthesis of pangenome openness, core/accessory structure, functional composition, conservation, and gene-content tradeoffs.
topicFitness-Validated Gene Function
Synthesis of essential genes, metabolic dependency, ICA modules, dark genes, and functional annotation repair through fitness evidence.