Kbase Uniref90
kbase_uniref90
Tenant: KBase ยท Snapshot 2026-04-29T21:35:53.838483+00:00
Schema status
discoveredCuration status
discoveredSource
berdl-spark-connect://metrics.berdl.kbase.us:443Citation & Attribution
Provider: KBase
Schema Browser
cluster
| Column | Type | Description |
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Projects Using This Collection
Self-Sufficiency, Anaerobic Toolkit, and Cultivation Bias in Clay-Confined Cultured Bacterial Genomes
Do BERDL's cultured bacterial genomes from clay-confined deep-subsurface environments recapitulate the genomic signature...
Gene Function Ecological Agora
Across the prokaryotic tree (GTDB r214; 293,059 genomes / 27,690 species), build a multi-resolution **innovation + acqui...
Atlas Pages
data type
Genes, Proteins, and Annotations
Gene and protein identifiers, functional annotation, literature coverage, orthology, and controlled vocabulary layers used to connect raw genomes to interpretable biology.
data collectionUniRef90
UniRef protein clusters at 90% identity
opportunityFunctional Innovation KO Atlas Reuse Test
Test whether the Functional Innovation KO Atlas helps explain pangenome, pathway, or plant-microbiome signals beyond generic annotation summaries.