PaperBLAST

Why This Collection Matters

kescience_paperblast is a BERDL database in the KE Science tenant. Gene-to-literature links and curated sequence annotation coverage from PaperBLAST.

What It Contains

The snapshot records 14 tables. Key tables include: genepaper, gene, snippet, curatedgene, curatedpaper, generif, uniq, site.

Best Uses

Use this page when a question depends on literature support, protein-family attention, curated functional evidence, or dark-matter prioritization. It is especially useful as a caveat layer for claims about novelty.

High-Value Joins

Join through protein accessions, duplicate sequence mappings, curated database identifiers, and PDB-linked structural fields. Record the exact accession vocabulary before joining to pangenome or structure collections.

Reuse And Gaps

High-value derived products include literature-coverage scores, understudied-family lists, and protein-to-paper evidence bundles. Missing complementary data include clearer bridges from PaperBLAST proteins into BERDL pangenome cluster identifiers.

Caveats

Discovery caveat: included from schema docs; absent from the 2026-03-14 ui/config/berdl_collections_snapshot.json seed snapshot. Refresh from live BERDL discovery before treating this page as complete.